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Crystal Structure of human ADP-ribosylhydrolase 1 (hARH1)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 150 mM Li-acetate, 25% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.12 41.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.28 α = 90 b = 52.79 β = 90 c = 140.34 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2008-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 1.8505 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.92 50 95.4 0.153 29.7 29.9 26290 24.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.92 1.97 71.1 0.805 3 9.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.92 30 25262 1029 99.39 0.15578 0.15458 0.1689 0.18527 0.1942 RANDOM 10.114
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.15 -1.25 -0.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.679 r_dihedral_angle_3_deg 14.796 r_dihedral_angle_4_deg 12.799 r_dihedral_angle_1_deg 8.47 r_scangle_it 5.802 r_scbond_it 3.798 r_angle_refined_deg 1.579 r_mcangle_it 1.563 r_angle_other_deg 0.997 r_mcbond_it 0.851
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.679 r_dihedral_angle_3_deg 14.796 r_dihedral_angle_4_deg 12.799 r_dihedral_angle_1_deg 8.47 r_scangle_it 5.802 r_scbond_it 3.798 r_angle_refined_deg 1.579 r_mcangle_it 1.563 r_angle_other_deg 0.997 r_mcbond_it 0.851 r_mcbond_other 0.224 r_chiral_restr 0.096 r_bond_refined_d 0.016 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2783 Nucleic Acid Atoms Solvent Atoms 130 Heterogen Atoms 30
Software Software Software Name Purpose REFMAC refinement