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Molecular Basis for the Autoregulation of the Protein Acetyl Transferase Rtt109
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.4 294 12% (w/v) PEG 4,000, 1 mM ZnCl2, and 100 mM Sodium Acetate, pH 4.4, temperature 294K, VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.6 52.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 120.782 α = 90 b = 68.886 β = 106.65 c = 55.241 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2007-09-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X3A NSLS X3A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 55305 3
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD 2 30 29452 1496 100 0.158 0.156 0.1562 0.189 0.1871 22.46
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.76 0.71 -0.93 -0.42
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.368 r_dihedral_angle_4_deg 21.731 r_dihedral_angle_3_deg 14.987 r_dihedral_angle_1_deg 6.205 r_scangle_it 3.951 r_scbond_it 2.54 r_mcangle_it 1.693 r_angle_refined_deg 1.545 r_mcbond_it 1.192 r_nbtor_refined 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.368 r_dihedral_angle_4_deg 21.731 r_dihedral_angle_3_deg 14.987 r_dihedral_angle_1_deg 6.205 r_scangle_it 3.951 r_scbond_it 2.54 r_mcangle_it 1.693 r_angle_refined_deg 1.545 r_mcbond_it 1.192 r_nbtor_refined 0.31 r_symmetry_hbond_refined 0.226 r_nbd_refined 0.207 r_symmetry_vdw_refined 0.192 r_xyhbond_nbd_refined 0.135 r_chiral_restr 0.115 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2960 Nucleic Acid Atoms Solvent Atoms 276 Heterogen Atoms 51
Software Software Software Name Purpose REFMAC refinement