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Crystal Structure of the S. pombe Peptidase Homology Domain of FACT complex subunit Spt16 (form A)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 293 13% PEG 2000, 0.1M Bis-Tris propane, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
Crystal Properties Matthews coefficient Solvent content 2.54 51.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 97.07 α = 90 b = 101.65 β = 90 c = 103.51 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2007-02-28 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2007-01-26 M MAD 1,2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM16 0.931 ESRF BM16 2 SYNCHROTRON SLS BEAMLINE X06SA 0.980, 0.976, 0.907 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.05 72.55 99.6 0.069 11 3.65 65005 64731 -3 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.05 2.17 99 0.59 2.19 3.7 10275
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.05 46.12 -3 61740 61555 3292 99.77 0.208 0.20767 0.20562 0.24466 0.2759 RANDOM 22.333
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.9 -0.6 1.5
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.286 r_dihedral_angle_4_deg 21.804 r_dihedral_angle_3_deg 15.74 r_dihedral_angle_1_deg 6.182 r_scangle_it 2.576 r_scbond_it 1.847 r_angle_refined_deg 1.419 r_angle_other_deg 1.399 r_mcangle_it 0.926 r_mcbond_it 0.503
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.286 r_dihedral_angle_4_deg 21.804 r_dihedral_angle_3_deg 15.74 r_dihedral_angle_1_deg 6.182 r_scangle_it 2.576 r_scbond_it 1.847 r_angle_refined_deg 1.419 r_angle_other_deg 1.399 r_mcangle_it 0.926 r_mcbond_it 0.503 r_mcbond_other 0.127 r_chiral_restr 0.076 r_bond_refined_d 0.012 r_gen_planes_refined 0.007 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6996 Nucleic Acid Atoms Solvent Atoms 451 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement ADSC data collection XDS data reduction XDS data scaling SOLVE phasing