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Visualizing GroEL-ES in the Act of Encapsulating a Non-Native Substrate Protein
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1AON
Sample NON-NATIVE RUBISCO SUBSTRATE PROTEIN ENCAPSULATED INSIDE THE CAVITY OF GROEL VARIANT EL43PY CAPPED BY GROES WITH THE ASSISTANCE OF NUCLEOTIDE ATP
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK III Cryogen Name ETHANE Sample Vitrification Details VITRIFICATION 1 -- CRYOGEN- ETHANE, HUMIDITY- 95, TEMPERATURE- 98, INSTRUMENT- FEI VITROBOT MARK III, METHOD BLOT FOR 1 SECOND BEFORE PLUNGIN
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 17611 Reported Resolution (Å) 9.2 Resolution Method Other Details SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2326. (DEPOSITION ID: 11455). Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (1AON) Refinement Space REAL Refinement Protocol FLEXIBLE FIT Refinement Target Cross-correlation coefficient Overall B Value Fitting Procedure Details METHOD--FLEXIBLE REFINEMENT PROTOCOL--X-RAY
Data Acquisition Detector Type GENERIC GATAN Electron Dose (electrons/Å**2) 30
Imaging Experiment 1 Date of Experiment 2008-08-16 Temperature (Kelvin) 50.5 Microscope Model JEOL KYOTO-3000SFF Minimum Defocus (nm) 1000 Maximum Defocus (nm) 4700 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 1.6 Imaging Mode OTHER Specimen Holder Model Nominal Magnification 50000 Calibrated Magnification 73530 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version MODEL FITTING DireX RECONSTRUCTION EMAN 1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details EACH FRAME