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Ascorbate peroxidase W41A-H42M mutant
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1OAF PDB ENTRY 1OAF
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 LISO4 2.5M, HEPES 100 MM PH 8.5
Crystal Properties Matthews coefficient Solvent content 1.99 37.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 82.629 α = 90 b = 82.629 β = 90 c = 74.95 γ = 90
Symmetry Space Group P 42 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 82.76 99.8 0.07 6.61 7.52 18087 2
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1OAF 2 46.08 1.39 18061 919 99.66 0.1551 0.1529 0.1548 0.1985 0.2003
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.66 f_angle_d 1.243 f_chiral_restr 0.088 f_bond_d 0.007 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1894 Nucleic Acid Atoms Solvent Atoms 261 Heterogen Atoms 72
Software Software Software Name Purpose PHENIX refinement XDS data reduction SCALA data scaling MOLREP phasing