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Crystal structure of JAK3 kinase domain in complex with an indazole substituted pyrrolopyrazine inhibitor
Crystallization Crystal Properties Matthews coefficient Solvent content 2.73 55.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.17 α = 90 b = 117.725 β = 97.66 c = 105.831 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2010-08-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.42 104.89 99.8 0.08 4.2 52977
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.42 2.51 100 0.42 3.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.42 104.89 51759 1129 99.83 0.1926 0.1913 0.2041 0.25385 0.257 RANDOM 48.801
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.91 0.41 -1.56 2.58
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.861 r_dihedral_angle_4_deg 16.018 r_dihedral_angle_3_deg 13.203 r_scangle_it 6.076 r_dihedral_angle_1_deg 5.559 r_scbond_it 4.294 r_mcangle_it 2.689 r_angle_other_deg 1.764 r_mcbond_it 1.566 r_angle_refined_deg 1.206
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.861 r_dihedral_angle_4_deg 16.018 r_dihedral_angle_3_deg 13.203 r_scangle_it 6.076 r_dihedral_angle_1_deg 5.559 r_scbond_it 4.294 r_mcangle_it 2.689 r_angle_other_deg 1.764 r_mcbond_it 1.566 r_angle_refined_deg 1.206 r_mcbond_other 0.255 r_chiral_restr 0.067 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8893 Nucleic Acid Atoms Solvent Atoms 384 Heterogen Atoms 176
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling REFMAC phasing