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The crystal structure of hemoglobin from woolly mammoth in the deoxy form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 BATCH 6.5 293 Ammonium sulfate, Ammonium phosphate, pH 6.5, Batch, temperature 293K, BATCH, temperature 293.0K
Crystal Properties Matthews coefficient Solvent content 2.43 49.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.64 α = 96.72 b = 59.08 β = 114.36 c = 62.1 γ = 113.86
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 95 CCD ADSC QUANTUM 270 Si(111) 2010-01-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-17A 1.00000 Photon Factory BL-17A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 46.51 94.4 0.098 2.6 28619
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.32 93.9 0.327 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 20 27132 1454 94.42 0.20632 0.20302 0.2061 0.2685 0.2668 RANDOM 35.422
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.22 1.28 1.43 1.99 -0.2 -1.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.895 r_dihedral_angle_4_deg 17.406 r_dihedral_angle_3_deg 16.445 r_dihedral_angle_1_deg 5.154 r_scangle_it 2.751 r_scbond_it 1.82 r_angle_refined_deg 1.359 r_mcangle_it 1.021 r_mcbond_it 0.555 r_chiral_restr 0.093
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.895 r_dihedral_angle_4_deg 17.406 r_dihedral_angle_3_deg 16.445 r_dihedral_angle_1_deg 5.154 r_scangle_it 2.751 r_scbond_it 1.82 r_angle_refined_deg 1.359 r_mcangle_it 1.021 r_mcbond_it 0.555 r_chiral_restr 0.093 r_bond_refined_d 0.012 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4484 Nucleic Acid Atoms Solvent Atoms 209 Heterogen Atoms 172
Software Software Software Name Purpose ADSC data collection MOLREP phasing REFMAC refinement MOSFLM data reduction