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Crystal structure of Swi5-Sfr1 complex from fission yeast
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 293 15% PEGMME2000, 0.2M sodium acetate, 0.2M ammonium sulfate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.56 65.43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.159 α = 90 b = 128.682 β = 90 c = 59.97 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r 2009-11-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-17A 1.0000 Photon Factory BL-17A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 50 99.8 0.085 14.1 33408 33341
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.28 99.1 0.531 3.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.2 20 33671 33341 1752 99.02 0.23224 0.23224 0.23044 0.2379 0.2662 0.2757 RANDOM 51.505
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.5 1.54 -2.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.788 r_dihedral_angle_3_deg 15.273 r_dihedral_angle_4_deg 14.872 r_dihedral_angle_1_deg 5.169 r_angle_refined_deg 1.324 r_angle_other_deg 0.874 r_chiral_restr 0.075 r_bond_refined_d 0.013 r_gen_planes_refined 0.004 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.788 r_dihedral_angle_3_deg 15.273 r_dihedral_angle_4_deg 14.872 r_dihedral_angle_1_deg 5.169 r_angle_refined_deg 1.324 r_angle_other_deg 0.874 r_chiral_restr 0.075 r_bond_refined_d 0.013 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3169 Nucleic Acid Atoms Solvent Atoms 164 Heterogen Atoms 51
Software Software Software Name Purpose ADSC data collection SHELXS phasing REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling