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crystal structure of a4b7 headpiece complexed with Fab ACT-1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 277 0.1 M Tris, 0.1 M NaCl, 8-10% PEG 20,000, VAPOR DIFFUSION, HANGING DROP, temperature 277K, pH 8.5
Crystal Properties Matthews coefficient Solvent content 3.58 65.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 137.78 α = 90 b = 122.74 β = 115.38 c = 158.14 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2008-12-06 M SINGLE WAVELENGTH 2 1 x-ray 100 M SINGLE WAVELENGTH 3 1 x-ray 100 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 1.00695 APS 23-ID-D 2 SYNCHROTRON APS BEAMLINE 23-ID-D 0.97945 APS 23-ID-D 3 SYNCHROTRON APS BEAMLINE 23-ID-D 0.97945,0.97960,0.94957 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2,3 3.15 50 99.3 0.089 0.089 10.3 3.78 82079 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2,3 3.15 3.299 100 0.915 0.915 1.9
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD 3.15 46.13 1.99 82057 1067 99.46 0.2204 0.2199 0.2236 0.2514 0.2527
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -32.8093 3.9672 -16.651 -11.7665
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 11.651 f_angle_d 0.689 f_chiral_restr 0.047 f_bond_d 0.003 f_plane_restr 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 21380 Nucleic Acid Atoms Solvent Atoms 21 Heterogen Atoms 298
Software Software Software Name Purpose HKL-2000 data collection SHARP phasing PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling