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The crystal structure of Snf1-related kinase 2.6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 298 PEG 3350, ammonium sulfate, pH 7.5, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.31 46.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.111 α = 90 b = 171.536 β = 90 c = 116.242 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2010-10-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 1.0 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 30 91 34149 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 29.85 31695 2454 99.94 0.2225 0.2206 0.2205 0.2461 0.2411 RANDOM 48.0162
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.66 -0.09 -0.57
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.409 r_dihedral_angle_4_deg 16.699 r_dihedral_angle_3_deg 13.661 r_sphericity_free 10.54 r_sphericity_bonded 9.048 r_dihedral_angle_1_deg 4.442 r_scangle_it 4.308 r_mcangle_it 2.948 r_scbond_it 2.648 r_rigid_bond_restr 1.624
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.409 r_dihedral_angle_4_deg 16.699 r_dihedral_angle_3_deg 13.661 r_sphericity_free 10.54 r_sphericity_bonded 9.048 r_dihedral_angle_1_deg 4.442 r_scangle_it 4.308 r_mcangle_it 2.948 r_scbond_it 2.648 r_rigid_bond_restr 1.624 r_mcbond_it 1.605 r_angle_refined_deg 1.174 r_angle_other_deg 0.808 r_mcbond_other 0.336 r_chiral_restr 0.067 r_bond_refined_d 0.012 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4596 Nucleic Acid Atoms Solvent Atoms 115 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction PHASER phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection SCALEPACK data scaling