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CHEY FROM THERMOTOGA MARITIMA (MN-III)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1TMY PDB ENTRY 1TMY
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 0.2M AMMONIUM SULFATE, 0.1M HEPES BUFFER (PH 7.0), 25% PEG 4000, 15MM MANGANESE CHLORIDE
Crystal Properties Matthews coefficient Solvent content 2.3 51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 109.658 α = 90 b = 64.719 β = 90 c = 33.81 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 295 AREA DETECTOR XUONG-HAMLIN MULTIWIRE COLLIMATOR 1995-09-15 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 20 97 0.09 6.8 3.7 12436
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.2 2.37 94 0.222 2.5 2.1
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1TMY 2.2 20 12436 12436 97 0.182 0.1737
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation t_dihedral_angle_d 19.4 t_it 7.9 t_angle_deg 2.44 t_nbd 0.027 t_gen_planes 0.021 t_trig_c_planes 0.018 t_bond_d 0.016 t_incorr_chiral_ct t_pseud_angle
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1800 Nucleic Acid Atoms Solvent Atoms 38 Heterogen Atoms 2
Software Software Software Name Purpose AMoRE phasing TNT refinement SDMS data reduction SDMS data scaling