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Crystal structure of the Streptomyces coelicolor WhiE ORFVI polyketide aromatase/cyclase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.4 277 0.1M Bis-Tris pH5.4, 0.2M magnesium chloride, 30% PEG3350, 5mM JRSi284 (ligand), VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.34 47.49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.517 α = 90 b = 40.488 β = 102.03 c = 66.806 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 CCD ADSC QUANTUM 315r 2009-02-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 1.0000 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 65.37 99.9 31201 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 99.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 41.29 31201 28074 3127 98.8 0.1898 0.18262 0.1832 0.25387 0.2562 RANDOM 28.67
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.44 0.37 -0.25 -1.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.202 r_dihedral_angle_4_deg 16.834 r_dihedral_angle_3_deg 16.803 r_dihedral_angle_1_deg 6.064 r_scangle_it 5.572 r_scbond_it 3.629 r_mcangle_it 2.449 r_mcbond_it 1.657 r_angle_refined_deg 1.587 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.202 r_dihedral_angle_4_deg 16.834 r_dihedral_angle_3_deg 16.803 r_dihedral_angle_1_deg 6.064 r_scangle_it 5.572 r_scbond_it 3.629 r_mcangle_it 2.449 r_mcbond_it 1.657 r_angle_refined_deg 1.587 r_nbtor_refined 0.306 r_nbd_refined 0.215 r_symmetry_vdw_refined 0.169 r_xyhbond_nbd_refined 0.163 r_symmetry_hbond_refined 0.128 r_chiral_restr 0.111 r_bond_refined_d 0.015 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2536 Nucleic Acid Atoms Solvent Atoms 166 Heterogen Atoms 56
Software Software Software Name Purpose ADSC data collection PHASER phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling