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Crystal structure of Zhui aromatase/cyclase from Streptomcyes sp. R1128
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.2 298 1.1M NAH2PO4/0.7M K2PO4, 0.1M CAPS PH 10.5, 0.2M LI2SO4, 0.1M NACITRATE, 0.1M GUANIDINE HCL, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.64 53.42
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.016 α = 90 b = 135.731 β = 90 c = 175.496 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2008-03-08 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 315 2009-04-15 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL7-1 SSRL BL7-1 2 SYNCHROTRON ALS BEAMLINE 8.2.2 0.97903, 0.97923, 0.96104 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.39 50 99.8 0.128 16.4 7 48090
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.39 2.49 99 0.466 3.7 6.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.39 50 45669 2430 99.3 0.196 0.193 0.1919 0.261 0.259 RANDOM 43.222
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.06 1.21 -0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.67 r_dihedral_angle_4_deg 22.685 r_dihedral_angle_3_deg 21.101 r_dihedral_angle_1_deg 8.325 r_scangle_it 5.254 r_scbond_it 3.452 r_angle_refined_deg 2.518 r_mcangle_it 1.948 r_mcbond_it 1.116 r_nbtor_refined 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.67 r_dihedral_angle_4_deg 22.685 r_dihedral_angle_3_deg 21.101 r_dihedral_angle_1_deg 8.325 r_scangle_it 5.254 r_scbond_it 3.452 r_angle_refined_deg 2.518 r_mcangle_it 1.948 r_mcbond_it 1.116 r_nbtor_refined 0.31 r_symmetry_vdw_refined 0.254 r_nbd_refined 0.252 r_symmetry_hbond_refined 0.229 r_chiral_restr 0.21 r_metal_ion_refined 0.204 r_xyhbond_nbd_refined 0.168 r_bond_refined_d 0.028 r_gen_planes_refined 0.01 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7675 Nucleic Acid Atoms Solvent Atoms 168 Heterogen Atoms 102
Software Software Software Name Purpose Blu-Ice data collection SOLVE phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling