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Structure of human Hexim1 (delta stammer) coiled coil domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 293 0.1 M sodium cacodylate, 0.1 M calcium acetate, 4% PEG 8000, 5 mM magnesium chloride, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.29 46.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.77 α = 90 b = 70.77 β = 90 c = 90.96 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2007-06-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 0.97943 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 45.5 100 0.085 14.7 13117 -3 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.15 100 0.386 3.55
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.1 45.5 13115 12487 629 99.99 0.23904 0.23617 0.249 0.2958 0.31 RANDOM 52.557
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.83 -2.83 5.65
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.181 r_dihedral_angle_4_deg 23.194 r_dihedral_angle_3_deg 22.228 r_scangle_it 11.037 r_scbond_it 9.137 r_mcangle_it 8.442 r_mcbond_it 7.136 r_dihedral_angle_1_deg 7.068 r_mcbond_other 3.707 r_angle_refined_deg 2.031
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.181 r_dihedral_angle_4_deg 23.194 r_dihedral_angle_3_deg 22.228 r_scangle_it 11.037 r_scbond_it 9.137 r_mcangle_it 8.442 r_mcbond_it 7.136 r_dihedral_angle_1_deg 7.068 r_mcbond_other 3.707 r_angle_refined_deg 2.031 r_angle_other_deg 1.135 r_chiral_restr 0.113 r_bond_refined_d 0.021 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1270 Nucleic Acid Atoms Solvent Atoms 51 Heterogen Atoms
Software Software Software Name Purpose ADSC data collection SHELXS phasing REFMAC refinement XDS data reduction XSCALE data scaling