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Human adipocyte lipid-binding protein FABP4, Apo form at 1.08 Ang resolution.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 293 1.6 M sodium citrate, pH 6.5, vapor diffusion, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.1 41.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 32.525 α = 90 b = 53.423 β = 90 c = 74.951 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2011-04-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL12-2 0.94312 SSRL BL12-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.08 43.5 93.9 0.049 11.7 4 53794 53794
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.08 1.13 80.7 0.437 0.437 1.7 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.08 43.5 50942 2728 93.1 0.15437 0.15247 0.1627 0.18914 0.1989 RANDOM 14.242
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.66 -0.61 -1.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.193 r_dihedral_angle_4_deg 18.22 r_dihedral_angle_3_deg 16.168 r_scangle_it 8.428 r_dihedral_angle_1_deg 6.172 r_scbond_it 5.844 r_mcangle_it 4.149 r_mcbond_it 2.654 r_rigid_bond_restr 2.552 r_angle_refined_deg 2.172
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.193 r_dihedral_angle_4_deg 18.22 r_dihedral_angle_3_deg 16.168 r_scangle_it 8.428 r_dihedral_angle_1_deg 6.172 r_scbond_it 5.844 r_mcangle_it 4.149 r_mcbond_it 2.654 r_rigid_bond_restr 2.552 r_angle_refined_deg 2.172 r_angle_other_deg 1.188 r_mcbond_other 1.002 r_chiral_restr 0.13 r_bond_refined_d 0.025 r_gen_planes_refined 0.01 r_gen_planes_other 0.004 r_bond_other_d 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1073 Nucleic Acid Atoms Solvent Atoms 147 Heterogen Atoms
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction XSCALE data scaling