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Crystal structure of Microcin C7 self immunity acetyltransferase MccE in complex with Coenzyme A and processed Microcin C7 antibiotic
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 7 282 PEG550MME, MgCl2, pH 7.0, hanging drop, temperature 282K
Crystal Properties Matthews coefficient Solvent content 2.34 47.45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.976 α = 90 b = 95.075 β = 90 c = 53.159 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.35 50 87162
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.35 25 86851 4351 99.36 0.1888 0.1874 0.1853 0.2156 0.2139 RANDOM 17.6371
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.84 -0.29 -0.55
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.884 r_dihedral_angle_4_deg 19.749 r_dihedral_angle_3_deg 9.895 r_dihedral_angle_1_deg 6.033 r_scangle_it 2.92 r_scbond_it 1.91 r_sphericity_bonded 1.883 r_angle_refined_deg 1.499 r_mcangle_it 1.308 r_rigid_bond_restr 1.015
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.884 r_dihedral_angle_4_deg 19.749 r_dihedral_angle_3_deg 9.895 r_dihedral_angle_1_deg 6.033 r_scangle_it 2.92 r_scbond_it 1.91 r_sphericity_bonded 1.883 r_angle_refined_deg 1.499 r_mcangle_it 1.308 r_rigid_bond_restr 1.015 r_mcbond_it 0.738 r_chiral_restr 0.082 r_bond_refined_d 0.007 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2787 Nucleic Acid Atoms Solvent Atoms 517 Heterogen Atoms 172
Software Software Software Name Purpose PHASER phasing REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction SCALEPACK data scaling