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Crystal structure of Microcin C7 self immunity acetyltransferase MccE in complex with Coenzyme A and Glutamyl sulfamoyl adenosine (ESA)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 7 282 PEG550MME, MgCl2, pH 7.0, hanging drop, temperature 282K
Crystal Properties Matthews coefficient Solvent content 2.37 48.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.979 α = 90 b = 94.804 β = 90 c = 53.339 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 50 99.3 0.065 12.2 8.6 124743
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.2 1.24 96 0.447 6.9 11911
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.2 25 124642 6263 99.3 0.1853 0.1845 0.1995 0.2041 RANDOM 16.0726
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.18 -0.22 0.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.896 r_dihedral_angle_4_deg 21.069 r_dihedral_angle_3_deg 10.007 r_dihedral_angle_1_deg 6.01 r_scangle_it 2.606 r_sphericity_bonded 1.919 r_scbond_it 1.701 r_angle_refined_deg 1.521 r_mcangle_it 1.214 r_rigid_bond_restr 0.886
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.896 r_dihedral_angle_4_deg 21.069 r_dihedral_angle_3_deg 10.007 r_dihedral_angle_1_deg 6.01 r_scangle_it 2.606 r_sphericity_bonded 1.919 r_scbond_it 1.701 r_angle_refined_deg 1.521 r_mcangle_it 1.214 r_rigid_bond_restr 0.886 r_mcbond_it 0.674 r_chiral_restr 0.1 r_bond_refined_d 0.007 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2836 Nucleic Acid Atoms Solvent Atoms 665 Heterogen Atoms 160
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction