X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.329130% PEG4000, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
2.0339.27

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 57.357α = 90
b = 57.357β = 90
c = 87.374γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315rmirrors2007-02-08MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM30AESRFBM30A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.352695.40.065311042944511.811.8
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.351.38585.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.3523.973110429445156394.690.151330.149650.18395RANDOM5.862
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.09-0.090.19
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.3
r_dihedral_angle_4_deg19.402
r_dihedral_angle_3_deg11.009
r_dihedral_angle_1_deg6.425
r_scangle_it1.654
r_angle_other_deg1.511
r_angle_refined_deg1.383
r_scbond_it1.266
r_mcangle_it0.892
r_mcbond_it0.594
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.3
r_dihedral_angle_4_deg19.402
r_dihedral_angle_3_deg11.009
r_dihedral_angle_1_deg6.425
r_scangle_it1.654
r_angle_other_deg1.511
r_angle_refined_deg1.383
r_scbond_it1.266
r_mcangle_it0.892
r_mcbond_it0.594
r_mcbond_other0.219
r_chiral_restr0.092
r_bond_refined_d0.011
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1240
Nucleic Acid Atoms
Solvent Atoms435
Heterogen Atoms7

Software

Software
Software NamePurpose
DNAdata collection
X-PLORmodel building
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
X-PLORphasing