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Microfluidic crystallization of Thaumatin using the Crystal Former
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 298 Microfluidic crystallization using the Crystal Former, 0.1 M HEPES, 0.8 M potassium sodium tartrate tetrahydrate, pH 7.5, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.83 56.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.914 α = 90 b = 57.914 β = 90 c = 150.13 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2008-08-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X6A NSLS X6A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.25 25 99.7 0.053 29.4 7.7 71681 71466 1.8 1.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.25 1.27 95.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.25 23 67744 67744 3609 100 0.1545 0.1545 0.1537 0.1555 0.16955 0.1715 RANDOM 11.995
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.23 0.23 -0.47
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.886 r_dihedral_angle_4_deg 15.49 r_dihedral_angle_3_deg 11.136 r_sphericity_free 7.047 r_dihedral_angle_1_deg 6.588 r_sphericity_bonded 4.281 r_scangle_it 3.677 r_scbond_it 2.685 r_mcangle_it 2.021 r_angle_refined_deg 1.461
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.886 r_dihedral_angle_4_deg 15.49 r_dihedral_angle_3_deg 11.136 r_sphericity_free 7.047 r_dihedral_angle_1_deg 6.588 r_sphericity_bonded 4.281 r_scangle_it 3.677 r_scbond_it 2.685 r_mcangle_it 2.021 r_angle_refined_deg 1.461 r_mcbond_it 1.432 r_rigid_bond_restr 1.416 r_nbtor_refined 0.31 r_nbd_refined 0.198 r_symmetry_vdw_refined 0.184 r_xyhbond_nbd_refined 0.138 r_symmetry_hbond_refined 0.111 r_chiral_restr 0.094 r_bond_refined_d 0.012 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1545 Nucleic Acid Atoms Solvent Atoms 201 Heterogen Atoms 10
Software Software Software Name Purpose HKL-3000 data collection MOLREP phasing REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling