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Human Aldose Reductase in Complex with NADP+ in Space Group P212121
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 277 2.04 M Ammonium Sulfate, 0.1M HEPES pH 7.5, 7% polyethylene glycol 400, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.64 53.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.934 α = 90 b = 86.046 β = 90 c = 105.104 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-05-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-1 0.9795 SSRL BL9-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 100 99.3 0.111 5.7 6.2 45182 45182 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.1 2.18 98.2 0.399 5.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.09 66.52 45044 45044 2259 99.2 0.2089 0.2089 0.2062 0.2205 0.2603 0.2738 RANDOM 28.37
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.02 -3.31 4.33
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.901 r_dihedral_angle_3_deg 15.304 r_dihedral_angle_4_deg 10.468 r_dihedral_angle_1_deg 6.147 r_scangle_it 3.515 r_mcangle_it 3.138 r_scbond_it 2.439 r_mcbond_it 2.084 r_angle_refined_deg 1.384 r_angle_other_deg 1.004
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.901 r_dihedral_angle_3_deg 15.304 r_dihedral_angle_4_deg 10.468 r_dihedral_angle_1_deg 6.147 r_scangle_it 3.515 r_mcangle_it 3.138 r_scbond_it 2.439 r_mcbond_it 2.084 r_angle_refined_deg 1.384 r_angle_other_deg 1.004 r_chiral_restr 0.222 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_mcbond_other 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5050 Nucleic Acid Atoms Solvent Atoms 336 Heterogen Atoms 147
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction ADSC data collection REFMAC phasing