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The Phenylacetyl-CoA monooxygenase PaaAC subcomplex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3PVT PDB ENTRY 3PVT
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 293 100 mM Na-ADA, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.45 49.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 110.257 α = 90 b = 109.062 β = 90 c = 305.926 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77.2 CCD RAYONIX MX-300 2009-12-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.65 49.2 99.9 0.081 10 6.5 107560
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.64 2.73 99.9 0.547 4 10749
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 3PVT 2.65 49.2 107560 5363 99.91 0.2357 0.2341 0.2287 0.2673 0.2606 RANDOM 54.7614
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.58 -0.84 1.41
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.286 r_dihedral_angle_4_deg 18.434 r_dihedral_angle_3_deg 15.122 r_dihedral_angle_1_deg 4.523 r_scangle_it 3.052 r_mcangle_it 1.801 r_scbond_it 1.695 r_mcbond_it 1.277 r_angle_refined_deg 1.059 r_chiral_restr 0.077
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.286 r_dihedral_angle_4_deg 18.434 r_dihedral_angle_3_deg 15.122 r_dihedral_angle_1_deg 4.523 r_scangle_it 3.052 r_mcangle_it 1.801 r_scbond_it 1.695 r_mcbond_it 1.277 r_angle_refined_deg 1.059 r_chiral_restr 0.077 r_bond_refined_d 0.009 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 24587 Nucleic Acid Atoms Solvent Atoms 217 Heterogen Atoms
Software Software Software Name Purpose SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction XDS data scaling HKL-2000 data reduction