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Multi-functional and mechanosensitive receptor binding activity of the Moraxella catarrhalis adhesin UspA1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 291 0.1 M MES, 0.2 M sodium dihydrogen phosphate, 0.2 M potassium dihydrogen phosphate, 1 M sodium chloride, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 3.81 67.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 118.219 α = 90 b = 118.219 β = 90 c = 176.57 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD ADSC QUANTUM 315r 2010-09-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.9795 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.93 102.38 99.9 0.116 16.3 12.3 29914 29914
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.94 29.6 2 29914 29696 1503 99.85 0.2033 0.2026 0.2091 0.2162 0.2218 RANDOM 63.741
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.38 2.69 5.38 -8.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.734 r_dihedral_angle_4_deg 17.732 r_dihedral_angle_3_deg 14.978 r_dihedral_angle_1_deg 5.604 r_scangle_it 3.796 r_scbond_it 1.95 r_mcangle_it 1.07 r_angle_refined_deg 1.04 r_mcbond_it 0.501 r_chiral_restr 0.072
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.734 r_dihedral_angle_4_deg 17.732 r_dihedral_angle_3_deg 14.978 r_dihedral_angle_1_deg 5.604 r_scangle_it 3.796 r_scbond_it 1.95 r_mcangle_it 1.07 r_angle_refined_deg 1.04 r_mcbond_it 0.501 r_chiral_restr 0.072 r_bond_refined_d 0.008 r_gen_planes_refined 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6117 Nucleic Acid Atoms Solvent Atoms 45 Heterogen Atoms
Software Software Software Name Purpose MOSFLM data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction