☰ Navigation Tabs
Crystal structure of the bacteriophage phi92 membrane-piercing protein gp138
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 291 10 mg/ml
10% - 12% PEG 2K
100mM - 200mM MgCl2
100mM Tris pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K 2 VAPOR DIFFUSION, HANGING DROP 7.5 291 10 mg/ml
10% - 12% PEG 2K
250mM KCl
50mM Tris pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.144 α = 90 b = 65.144 β = 90 c = 329.375 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2010-03-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06DA 1.000 SLS X06DA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.64 55.61 99.8 0.084 0.093 18.4 10.5 8322 8304 2 44.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.642 2.78 98.1 0.517 0.469 10.5
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 2.642 55.607 1.94 8279 415 99.16 0.2127 0.2107 0.2033 0.2501 0.2553 66.22
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -10.4162 -10.4162 20.8324
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 12.711 f_angle_d 0.794 f_chiral_restr 0.054 f_bond_d 0.004 f_plane_restr 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1481 Nucleic Acid Atoms Solvent Atoms 39 Heterogen Atoms 2
Software Software Software Name Purpose RemDAq data collection PHASER phasing PHENIX refinement XDS data reduction XSCALE data scaling