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Crystal structure of Mutant of ht- Alcohol Dehydrogenase with substrate analogue butyramide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 303 2.5M ammonium sulfate
2% PEG400
100mM HEPES pH7.5, VAPOR DIFFUSION, temperature 303K
Crystal Properties Matthews coefficient Solvent content 2.85 56.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 145.65 α = 90 b = 145.65 β = 90 c = 135.518 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 93 IMAGE PLATE RIGAKU RAXIS IV M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH3R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 50 36059
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.9 49.61 34260 1799 99.75 0.21002 0.2061 0.2037 0.28595 0.2817 RANDOM 39.093
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.01 0.01 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.866 r_dihedral_angle_4_deg 23.102 r_dihedral_angle_3_deg 22.01 r_dihedral_angle_1_deg 11.195 r_scangle_it 2.666 r_angle_refined_deg 1.87 r_scbond_it 1.513 r_mcangle_it 1.183 r_mcbond_it 0.613 r_chiral_restr 0.163
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.866 r_dihedral_angle_4_deg 23.102 r_dihedral_angle_3_deg 22.01 r_dihedral_angle_1_deg 11.195 r_scangle_it 2.666 r_angle_refined_deg 1.87 r_scbond_it 1.513 r_mcangle_it 1.183 r_mcbond_it 0.613 r_chiral_restr 0.163 r_bond_refined_d 0.016 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10156 Nucleic Acid Atoms Solvent Atoms 3 Heterogen Atoms 52
Software Software Software Name Purpose StructureStudio data collection REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling