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Structure of I274A variant of E. coli KatE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 9 293 17% PEG3350, 1.6 M LiCl, 0.1 M Tris, pH 9.0, vapor diffusion, hanging drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.14 42.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 93.56 α = 90 b = 133.17 β = 109.24 c = 122.81 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD Marmosaic mirrors 2009-08-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.97934 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 31.288 88.9 0.097 7.5 2.8 197718 197718 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 2 74 0.284 0.284 2.1 2.2 23877
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 31.29 197718 197565 9959 88.64 0.14 0.14 0.1373 0.1377 0.191 0.1908 RANDOM 14.8245
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.04 0.13 -0.13 0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.589 r_dihedral_angle_4_deg 15.092 r_dihedral_angle_3_deg 14.788 r_dihedral_angle_1_deg 6.653 r_scangle_it 3.915 r_scbond_it 2.641 r_angle_refined_deg 2 r_mcangle_it 1.583 r_mcbond_it 0.995 r_chiral_restr 0.183
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.589 r_dihedral_angle_4_deg 15.092 r_dihedral_angle_3_deg 14.788 r_dihedral_angle_1_deg 6.653 r_scangle_it 3.915 r_scbond_it 2.641 r_angle_refined_deg 2 r_mcangle_it 1.583 r_mcbond_it 0.995 r_chiral_restr 0.183 r_bond_refined_d 0.024 r_gen_planes_refined 0.011
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 22952 Nucleic Acid Atoms Solvent Atoms 3183 Heterogen Atoms 352
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction MxDC data collection REFMAC phasing