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Structure of I274V variant of E. coli KatE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 9 293 17% PEG3350, 1.6 M LiCl, 0.1 M Tris, pH 9.0, vapor diffusion, hanging drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.13 42.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 93.5 α = 90 b = 132.82 β = 109.47 c = 122.59 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD mirrors 2009-08-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.98 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 115.58 95 0.119 7 3.7 426044 426044 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.58 89.1 0.59 0.59 1.2 3.1 58221
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.5 29.16 426044 425940 21394 94.83 0.1504 0.1504 0.1486 0.1483 0.1848 0.1846 RANDOM 13.9812
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.14 0.55 -0.54 1.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.643 r_dihedral_angle_4_deg 14.284 r_dihedral_angle_3_deg 14.199 r_dihedral_angle_1_deg 6.323 r_scangle_it 4.78 r_scbond_it 3.12 r_angle_refined_deg 2.335 r_mcangle_it 2.17 r_mcbond_it 1.32 r_chiral_restr 0.214
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.643 r_dihedral_angle_4_deg 14.284 r_dihedral_angle_3_deg 14.199 r_dihedral_angle_1_deg 6.323 r_scangle_it 4.78 r_scbond_it 3.12 r_angle_refined_deg 2.335 r_mcangle_it 2.17 r_mcbond_it 1.32 r_chiral_restr 0.214 r_bond_refined_d 0.027 r_gen_planes_refined 0.015
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 22948 Nucleic Acid Atoms Solvent Atoms 3269 Heterogen Atoms 696
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction MxDC data collection MOSFLM data reduction REFMAC phasing