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Human adipocyte lipid-binding protein FABP4 in complex with citric acid
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 293 1.6 M sodium citrate, pH 6.5, vapor diffusion, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.08 40.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 32.239 α = 90 b = 53.316 β = 90 c = 75.002 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2010-02-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL7-1 1.000 SSRL BL7-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.25 50 98.6 0.092 9.9 6.7 36136
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.25 1.29 91.8 0.37 5.5
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.25 43.46 36054 1807 98.6 0.171 0.168 0.212 0.2253 21.36
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.34 -0.06 0.4
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.683 r_dihedral_angle_4_deg 16.934 r_dihedral_angle_3_deg 12.838 r_scangle_it 7.365 r_dihedral_angle_1_deg 6.165 r_scbond_it 5.113 r_mcangle_it 3.739 r_mcbond_it 2.492 r_angle_refined_deg 2.259 r_rigid_bond_restr 2.061
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.683 r_dihedral_angle_4_deg 16.934 r_dihedral_angle_3_deg 12.838 r_scangle_it 7.365 r_dihedral_angle_1_deg 6.165 r_scbond_it 5.113 r_mcangle_it 3.739 r_mcbond_it 2.492 r_angle_refined_deg 2.259 r_rigid_bond_restr 2.061 r_angle_other_deg 0.977 r_mcbond_other 0.838 r_chiral_restr 0.124 r_bond_refined_d 0.022 r_gen_planes_refined 0.01 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1072 Nucleic Acid Atoms Solvent Atoms 162 Heterogen Atoms 13
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing REFMAC refinement PDB_EXTRACT data extraction