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Crystal Structure of the calcium sensor calcium-binding protein 1 (CaBP1)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 293 1.9M (NH4)2SO4, 2-4% 1,2-propanediol, 0.1M citrate/sodium citrate pH5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.41 63.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 206.044 α = 90 b = 206.044 β = 90 c = 206.044 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2008-07-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1.11587 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 50 97.5 0.095 6.4 4 32321 31525 99.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.9 3.06 96.2 0.451 1.6 2.1 4029
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.9 46.07 27061 1432 88.5 0.21482 0.2129 0.2146 0.25029 0.2574 RANDOM 106.125
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.011 r_dihedral_angle_4_deg 22.595 r_dihedral_angle_3_deg 21.441 r_dihedral_angle_1_deg 5.7 r_scangle_it 3.93 r_mcangle_it 3.226 r_scbond_it 2.447 r_mcbond_it 1.896 r_angle_refined_deg 1.697 r_chiral_restr 0.108
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.011 r_dihedral_angle_4_deg 22.595 r_dihedral_angle_3_deg 21.441 r_dihedral_angle_1_deg 5.7 r_scangle_it 3.93 r_mcangle_it 3.226 r_scbond_it 2.447 r_mcbond_it 1.896 r_angle_refined_deg 1.697 r_chiral_restr 0.108 r_bond_refined_d 0.02 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7093 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 12
Software Software Software Name Purpose HKL-2000 data collection PHENIX model building REFMAC refinement MOSFLM data reduction SCALA data scaling PHENIX phasing