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MIHFGND segment 137-143 from mouse prion
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 298 100mM HEPES ph 7.0, 10% PEG 1200, vapor diffusion, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.38 10.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.28 α = 90 b = 4.873 β = 90 c = 31.107 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 2005-12-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID13 0.9466 ESRF ID13
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.61 90 97.3 0.206 7 6.3 714
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.61 1.71 88.7 0.28 2.7 55
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.61 21.7 696 72 94.18 0.169 0.1659 0.1798 0.1972 0.2089 RANDOM 12.4124
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.48 -0.63 1.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.995 r_dihedral_angle_3_deg 11.468 r_dihedral_angle_1_deg 7.78 r_scangle_it 2.114 r_scbond_it 1.535 r_mcangle_it 1.469 r_angle_refined_deg 1.297 r_mcbond_it 0.827 r_angle_other_deg 0.609 r_mcbond_other 0.204
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.995 r_dihedral_angle_3_deg 11.468 r_dihedral_angle_1_deg 7.78 r_scangle_it 2.114 r_scbond_it 1.535 r_mcangle_it 1.469 r_angle_refined_deg 1.297 r_mcbond_it 0.827 r_angle_other_deg 0.609 r_mcbond_other 0.204 r_chiral_restr 0.088 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 58 Nucleic Acid Atoms Solvent Atoms 3 Heterogen Atoms 7
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction