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Crystal Structure of Bovine Xanthine Oxidase in Complex with Hypoxanthine
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 sitting batch 7 298 PEG 8000, pH 7.0, sitting batch, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.49 50.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 133.016 α = 90 b = 73.645 β = 97.05 c = 138.696 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD MAR CCD 165 mm 2008-07-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-C 0.9793 APS 24-ID-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 23.5 95.1 246393 234367 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.847 95.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 23.5 246393 234367 11843 95.07 0.1986 0.1967 0.1964 0.2344 0.2349 RANDOM 23.8705
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.98 -0.02 0.76 0.22
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.269 r_dihedral_angle_4_deg 17.472 r_dihedral_angle_3_deg 15.422 r_dihedral_angle_1_deg 5.986 r_scangle_it 3.666 r_scbond_it 2.346 r_mcangle_it 1.432 r_angle_refined_deg 1.431 r_mcbond_it 0.898 r_nbtor_refined 0.304
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.269 r_dihedral_angle_4_deg 17.472 r_dihedral_angle_3_deg 15.422 r_dihedral_angle_1_deg 5.986 r_scangle_it 3.666 r_scbond_it 2.346 r_mcangle_it 1.432 r_angle_refined_deg 1.431 r_mcbond_it 0.898 r_nbtor_refined 0.304 r_symmetry_hbond_refined 0.278 r_symmetry_vdw_refined 0.259 r_nbd_refined 0.214 r_xyhbond_nbd_refined 0.165 r_chiral_restr 0.09 r_bond_refined_d 0.012 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 18881 Nucleic Acid Atoms Solvent Atoms 1274 Heterogen Atoms 198
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction SCALA data scaling MOLREP phasing