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Crystal structure of chicken IL-1 hydrophobic cavity mutant 157
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 293 1.16M (NH4)2SO4, 0.1M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.98 37.88
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.8 α = 90 b = 38.666 β = 90 c = 103.334 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77 CCD ADSC QUANTUM 315 2010-05-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSRRC BEAMLINE BL13B1 1.0000 NSRRC BL13B1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.67 51.64 99.1 17348 17192
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.67 51.64 16465 16319 871 99.11 0.18055 0.17761 0.176 0.23723 0.2344 RANDOM 21.497
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.98 1.71 -0.73
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.796 r_dihedral_angle_4_deg 17.748 r_dihedral_angle_3_deg 13.948 r_dihedral_angle_1_deg 13.748 r_sphericity_free 7.154 r_scangle_it 5.327 r_sphericity_bonded 4.548 r_scbond_it 4.485 r_rigid_bond_restr 4.112 r_mcangle_it 2.696
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.796 r_dihedral_angle_4_deg 17.748 r_dihedral_angle_3_deg 13.948 r_dihedral_angle_1_deg 13.748 r_sphericity_free 7.154 r_scangle_it 5.327 r_sphericity_bonded 4.548 r_scbond_it 4.485 r_rigid_bond_restr 4.112 r_mcangle_it 2.696 r_mcbond_it 2.069 r_angle_refined_deg 1.786 r_nbtor_refined 0.311 r_nbd_refined 0.206 r_symmetry_vdw_refined 0.195 r_symmetry_hbond_refined 0.18 r_xyhbond_nbd_refined 0.167 r_chiral_restr 0.127 r_bond_refined_d 0.018 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1193 Nucleic Acid Atoms Solvent Atoms 116 Heterogen Atoms
Software Software Software Name Purpose HKL-2000 data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling