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Crystal Structure of a StWhy2-rcERE32 complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1L3A PDB ENTRY 1L3A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 298 21% PEG6000, 0.1M Tris, 2.0M LiCl, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.15 47.35
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 166.667 α = 90 b = 166.667 β = 90 c = 166.667 γ = 90
Symmetry Space Group F 4 3 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2007-06-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.10 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.35 50 99.5 0.954 16.5 29.1 8763 8716 56.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.35 2.43 95.4 0.75 2.3 6.5 805
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1L3A 2.35 41.667 0.13 8716 8437 900 96.35 0.2221 0.217 0.2229 0.2626 0.2686 RANDOM 63.46
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.6398 -2.6398 -2.6398
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 20.102 f_angle_d 1.321 f_chiral_restr 0.077 f_bond_d 0.01 f_plane_restr 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1266 Nucleic Acid Atoms 189 Solvent Atoms 60 Heterogen Atoms
Software Software Software Name Purpose PHENIX refinement PHENIX model building CNS refinement CBASS data collection HKL-2000 data reduction HKL-2000 data scaling PHENIX phasing CNS phasing