Experiment: 3MI3

X-RAY DIFFRACTION

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	3IVS	PDB entry 3IVS

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	5.8	297	Sodium and potassium phosphate, pH 5.8, VAPOR DIFFUSION, HANGING DROP, temperature 297K

Crystal Properties
Matthews coefficient	Solvent content
3.48	64.65

Symmetry
Space Group	P 62

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	MARMOSAIC 300 mm CCD		2008-04-12	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	APS BEAMLINE 21-ID-G	0.97856	APS	21-ID-G

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	R Sym I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.38	40	98	0.057	0.057	35.7	9	50397	50397	-3	-3

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	R-Sym I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.38	2.47	89.1		0.472	0.472	3.02	6.7	4532

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	PDB entry 3IVS	2.38	38.69	50367	2556	98.02	0.171	0.17	0.169	0.203	0.2011	RANDOM	54.541

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.31	-0.15		-0.31		0.46

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	34.73
r_dihedral_angle_4_deg	18.678
r_dihedral_angle_3_deg	15.157
r_dihedral_angle_1_deg	5.908
r_scangle_it	3.11
r_scbond_it	1.907
r_angle_refined_deg	1.385
r_mcangle_it	1.11
r_mcbond_it	0.577
r_nbtor_refined	0.298

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	34.73
r_dihedral_angle_4_deg	18.678
r_dihedral_angle_3_deg	15.157
r_dihedral_angle_1_deg	5.908
r_scangle_it	3.11
r_scbond_it	1.907
r_angle_refined_deg	1.385
r_mcangle_it	1.11
r_mcbond_it	0.577
r_nbtor_refined	0.298
r_symmetry_hbond_refined	0.292
r_symmetry_vdw_refined	0.204
r_nbd_refined	0.203
r_xyhbond_nbd_refined	0.152
r_symmetry_metal_ion_refined	0.127
r_metal_ion_refined	0.102
r_chiral_restr	0.092
r_bond_refined_d	0.013
r_gen_planes_refined	0.005