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Glucose-6-phosphate isomerase from Francisella tularensis complexed with fructose-6-phosphate.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.2 289 0.2 M sodium/potassium phosphate buffer, 35% MPD, 10 mM fructose-6-phosphate, pH 6.2, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.55 51.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.272 α = 90 b = 114.272 β = 90 c = 83.723 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r 2009-10-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.9792 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.65 32.1 99.9 0.088 11.5 8.8 76000 76000 32.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.65 1.68 99.2 0.664 2.14 6.6 3723
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.65 32.1 75874 75874 3810 99.74 0.132 0.132 0.131 0.1902 0.16 0.2089 RANDOM 17.864
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.69 -0.35 -0.69 1.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.268 r_dihedral_angle_4_deg 17.655 r_dihedral_angle_3_deg 14.27 r_dihedral_angle_1_deg 5.444 r_scangle_it 5.088 r_scbond_it 3.44 r_mcangle_it 2.041 r_angle_refined_deg 1.453 r_rigid_bond_restr 1.417 r_mcbond_it 1.311
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.268 r_dihedral_angle_4_deg 17.655 r_dihedral_angle_3_deg 14.27 r_dihedral_angle_1_deg 5.444 r_scangle_it 5.088 r_scbond_it 3.44 r_mcangle_it 2.041 r_angle_refined_deg 1.453 r_rigid_bond_restr 1.417 r_mcbond_it 1.311 r_angle_other_deg 0.937 r_mcbond_other 0.435 r_chiral_restr 0.093 r_bond_refined_d 0.017 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4620 Nucleic Acid Atoms Solvent Atoms 504 Heterogen Atoms 45
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction SBC-Collect data collection HKL-3000 data reduction HKL-3000 data scaling SHELXD phasing MLPHARE phasing DM phasing SOLVE phasing RESOLVE phasing HKL-3000 phasing