☰ Navigation Tabs
Crystal structure of Bacillus anthracis HemL-1, glutamate semialdehyde aminotransferase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 25% PEG 3350, 100mM Bis-Tris, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.99 38.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.84 α = 90 b = 93.92 β = 90 c = 105.64 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD MARMOSAIC 225 mm CCD beryllium lens 2009-11-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-F 0.97872 APS 21-ID-F
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.05 50 99.4 0.092 17.7 7.8 47797 48086 4.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.05 2.12 100 0.491 4.2 7.4 4708
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (I) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.05 43.35 4.2 48023 47807 2437 99.55 0.16 0.159 0.157 0.1919 0.192 0.2195 RANDOM 7.719
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.11 -1.38 2.49
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.88 r_dihedral_angle_4_deg 21.902 r_dihedral_angle_3_deg 13.811 r_scangle_it 6.091 r_dihedral_angle_1_deg 5.702 r_scbond_it 4.139 r_mcangle_it 2.086 r_mcbond_it 1.281 r_angle_refined_deg 1.185 r_chiral_restr 0.078
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.88 r_dihedral_angle_4_deg 21.902 r_dihedral_angle_3_deg 13.811 r_scangle_it 6.091 r_dihedral_angle_1_deg 5.702 r_scbond_it 4.139 r_mcangle_it 2.086 r_mcbond_it 1.281 r_angle_refined_deg 1.185 r_chiral_restr 0.078 r_bond_refined_d 0.009 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6509 Nucleic Acid Atoms Solvent Atoms 631 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction BLU-MAX data collection HKL-2000 data reduction HKL-2000 data scaling PHENIX phasing