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Crystal structure of DHT-bound androgen receptor in complex with the first motif of steroid receptor coactivator 3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 293 PEG 3350, pH 7.5, vapor diffusion, hanging drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.29 46.32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.314 α = 90 b = 66.704 β = 90 c = 73.137 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2006-06-24 SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 1.00 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 50 92.2 0.053 41369 38124 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.55 1.61 92 0.428 2.2 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.55 50 40901 37974 2927 98.88 0.18139 0.17947 0.1914 0.20568 0.2112 RANDOM 24.052
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.32 -0.9 -1.43
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.852 r_dihedral_angle_3_deg 12.548 r_dihedral_angle_4_deg 10.547 r_sphericity_free 9.433 r_scangle_it 4.989 r_dihedral_angle_1_deg 3.886 r_sphericity_bonded 3.556 r_scbond_it 3.295 r_mcangle_it 2.466 r_rigid_bond_restr 1.635
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.852 r_dihedral_angle_3_deg 12.548 r_dihedral_angle_4_deg 10.547 r_sphericity_free 9.433 r_scangle_it 4.989 r_dihedral_angle_1_deg 3.886 r_sphericity_bonded 3.556 r_scbond_it 3.295 r_mcangle_it 2.466 r_rigid_bond_restr 1.635 r_mcbond_it 1.407 r_angle_refined_deg 1.253 r_angle_other_deg 0.888 r_mcbond_other 0.421 r_chiral_restr 0.083 r_bond_refined_d 0.013 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2137 Nucleic Acid Atoms Solvent Atoms 211 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection DENZO data reduction SCALEPACK data scaling