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Structure of a putative tetr transcriptional regulator (pa3699) from pseudomonas aeruginosa pa01
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 295 25% PEG2KMME, CaCl2 0.05 M, 0.1 M Bis-Tris, 0.3 M NDSB 195, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 1.9 35.27
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 157.321 α = 90 b = 82.879 β = 90.01 c = 46.618 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 MIRROR 2006-02-13 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 50 99.9 0.076 0.076 35.27 5.7 35089 35089 -3 49.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.14 100 0.643 0.643 2.6 5.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.1 50 33319 33319 1760 99.88 0.20707 0.20408 0.2325 0.26182 0.2792 RANDOM 17.871
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.01 -0.01 -0.72 1.73
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.19 r_dihedral_angle_4_deg 21.536 r_dihedral_angle_3_deg 17.976 r_dihedral_angle_1_deg 6.003 r_scangle_it 5.504 r_scbond_it 3.538 r_angle_refined_deg 1.796 r_mcangle_it 1.79 r_angle_other_deg 1.034 r_mcbond_it 0.963
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.19 r_dihedral_angle_4_deg 21.536 r_dihedral_angle_3_deg 17.976 r_dihedral_angle_1_deg 6.003 r_scangle_it 5.504 r_scbond_it 3.538 r_angle_refined_deg 1.796 r_mcangle_it 1.79 r_angle_other_deg 1.034 r_mcbond_it 0.963 r_mcbond_other 0.274 r_chiral_restr 0.099 r_bond_refined_d 0.022 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4685 Nucleic Acid Atoms Solvent Atoms 92 Heterogen Atoms 49
Software Software Software Name Purpose HKL-3000 phasing MLPHARE phasing DM model building SHELXD phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling DM phasing