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MK2 complexed to inhibitor N4-(7-(benzofuran-2-yl)-1H-indazol-5-yl)pyrimidine-2,4-diamine
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8 291 1.75 M Ammonium Sulfate, 0.1 M Na Citrate, pH 8.0., VAPOR DIFFUSION, SITTING DROP, temperature 291.0K
Crystal Properties Matthews coefficient Solvent content 2.98 58.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 139.351 α = 90 b = 179.793 β = 90 c = 214.376 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2005-09-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID 1.00 APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 50 0.093 27 5.6 116686
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.9 3 0.401 3.83 2.6 10342
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.9 20 110192 5825 97.35 0.23324 0.22987 0.2194 0.29759 0.2878 RANDOM 66.829
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.07 -0.05 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.767 r_dihedral_angle_3_deg 22.769 r_dihedral_angle_4_deg 21.867 r_dihedral_angle_1_deg 7.387 r_scangle_it 3.596 r_scbond_it 2.169 r_angle_refined_deg 1.928 r_mcangle_it 1.808 r_mcbond_it 1.035 r_symmetry_hbond_refined 0.394
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.767 r_dihedral_angle_3_deg 22.769 r_dihedral_angle_4_deg 21.867 r_dihedral_angle_1_deg 7.387 r_scangle_it 3.596 r_scbond_it 2.169 r_angle_refined_deg 1.928 r_mcangle_it 1.808 r_mcbond_it 1.035 r_symmetry_hbond_refined 0.394 r_symmetry_vdw_refined 0.368 r_nbtor_refined 0.328 r_nbd_refined 0.265 r_xyhbond_nbd_refined 0.181 r_chiral_restr 0.123 r_bond_refined_d 0.018 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 27853 Nucleic Acid Atoms Solvent Atoms 20 Heterogen Atoms 286
Software Software Software Name Purpose HKL-2000 data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling