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CRYSTAL STRUCTURE OF betaine-aldehyde dehydrogenase FROM Pseudoalteromonas atlantica T6c
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 294 0.1M SODIUM ACETATE, PH 4.6, 30% PEG4000, 200MM AMMONIUM ACETATE, 10% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K
Crystal Properties Matthews coefficient Solvent content 2.34 47.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.785 α = 90 b = 163.718 β = 90.59 c = 142.069 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 CCD ADSC QUANTUM 315 MIRRORS 2009-09-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 40 98.8 0.113 3.7 2.6 310867 -5 30.32
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 97 0.5 2.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.9 20 293687 9231 97.6 0.212 0.21 0.2109 0.274 0.2744 RANDOM 40.36
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.37 -0.65 -1.79 1.4
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.537 r_dihedral_angle_3_deg 17.494 r_dihedral_angle_4_deg 15.625 r_scangle_it 11.858 r_scbond_it 10.018 r_mcangle_it 7.091 r_dihedral_angle_1_deg 6.207 r_mcbond_it 5.89 r_angle_refined_deg 1.376 r_nbtor_refined 0.297
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.537 r_dihedral_angle_3_deg 17.494 r_dihedral_angle_4_deg 15.625 r_scangle_it 11.858 r_scbond_it 10.018 r_mcangle_it 7.091 r_dihedral_angle_1_deg 6.207 r_mcbond_it 5.89 r_angle_refined_deg 1.376 r_nbtor_refined 0.297 r_symmetry_hbond_refined 0.221 r_xyhbond_nbd_refined 0.185 r_nbd_refined 0.161 r_symmetry_vdw_refined 0.113 r_chiral_restr 0.097 r_bond_refined_d 0.011 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 29404 Nucleic Acid Atoms Solvent Atoms 1612 Heterogen Atoms 134
Software Software Software Name Purpose SHELX model building REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling SHELX phasing