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80S ribosome bound to mRNA containing Kozak sequence and to one tRNA
Sample Components
80S ribosome
messenger RNA
transfer RNA
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK II
Cryogen Name
ETHANE
Sample Vitrification Details
Plunged into liquid ethane (FEI VITROBOT MARK II)
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
25136
Reported Resolution (Å)
6.2
Resolution Method
FSC 0.143 CUT-OFF
Other Details
(Single particle--Applied symmetry: C1)
Refinement Type
Symmetry Type
POINT
Point Symmetry
C1
Map-Model Fitting and Refinement
Id
1 (3U5B, 3U5C, 3U5D, 3U5E, 4GD1, 4GD1, 3J3B)
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
cross-correlation
Overall B Value
Fitting Procedure
Details
REFINEMENT PROTOCOL--rigid body DETAILS--3U5B, 3U5C, 3U5D, and 3U5E were
combined prior to fitting. tRNA and mRNA were modeled using individual tRNA ...
REFINEMENT PROTOCOL--rigid body DETAILS--3U5B, 3U5C, 3U5D, and 3U5E were
combined prior to fitting. tRNA and mRNA were modeled using individual tRNA and
mRNA from the crystal structure (4GD1) of the hybrid-state 70S ribosome
containing P/E tRNA.