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Blotted manually in ambient atmosphere before plunging into ethane cooled by liquid nitrogen.
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
117330
Reported Resolution (Å)
5.5
Resolution Method
FSC 0.143 CUT-OFF
Other Details
Single particle details: The particles were selected using an automatic selection program (Single particle--Applied symmetry: I)
Refinement Type
Symmetry Type
POINT
Point Symmetry
I
Map-Model Fitting and Refinement
Id
1 (1POV, 1POV, 1POV)
Refinement Space
RECIPROCAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
mean amplitude-weighted cosine of the phase difference
Overall B Value
Fitting Procedure
Details
METHOD--rigid body REFINEMENT PROTOCOL--rigid body DETAILS--Most of the model
was docked, with specific areas of discrepancy fitted. The fitting was ...
METHOD--rigid body REFINEMENT PROTOCOL--rigid body DETAILS--Most of the model
was docked, with specific areas of discrepancy fitted. The fitting was rigid
body with flexible fitting or deletion of selected polypeptide segments. Rigid
bodies for VP1, VP2, VP3, and the VP3 beta tube were defined to include beta
barrels and non-covalently attached polypeptides. Each rigid body was
repeatedly fitted manually and then refined. Disordered polypeptide segments
were removed. Several rearranged segments were included as approximate backbone
traces and refined.