Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
Enterovirus 71 complexed with Fab Fragment of MA28-7 neutralizing antibody
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK III
Cryogen Name
OTHER
Sample Vitrification Details
Plunged into ethane-propane mixture (FEI VITROBOT MARK III)
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
27026
Reported Resolution (Å)
23.4
Resolution Method
FSC 0.5 CUT-OFF
Other Details
The breaksym option in EMAN2 was used to search for the icosahedrally-related orientations. (Single particle details: Selected particles were low-pass ...
The breaksym option in EMAN2 was used to search for the icosahedrally-related orientations. (Single particle details: Selected particles were low-pass filtered at 10 Angstrom. Asymmetric reconstruction was performed with the breaksym option in EMAN2.) (Single particle--Applied symmetry: C1)
Refinement Type
Symmetry Type
POINT
Point Symmetry
C1
Map-Model Fitting and Refinement
Id
1 (3GK8, 3GK8)
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
correlation coefficient
Overall B Value
Fitting Procedure
Details
REFINEMENT PROTOCOL--rigid body DETAILS--The Fab structure was fitted manually,
then refined in Chimera.