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Independent reconstruction of Mm-cpn cryo-EM density map from half dataset in the closed state (training map)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1Q3Q
Sample Mm-cpn with 1mM ATP/AlFx
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK III Cryogen Name ETHANE Sample Vitrification Details Blotted once for 3 seconds before plunging into liquid ethane (FEI VITROBOT MARK III)
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 22571 Reported Resolution (Å) 4.3 Resolution Method FSC 0.5 CUT-OFF Other Details (Single particle--Applied symmetry: D8) Refinement Type Symmetry Type POINT Point Symmetry D8
Map-Model Fitting and Refinement Id 1 (1Q3Q) Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN ULTRASCAN 4000 (4k x 4k) Electron Dose (electrons/Å**2) 20
Imaging Experiment 1 Date of Experiment 2008-02-29 Temperature (Kelvin) 100 Microscope Model JEOL 3200FSC Minimum Defocus (nm) 1000 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 4.1 Imaging Mode BRIGHT FIELD Specimen Holder Model JEOL 3200FSC CRYOHOLDER Nominal Magnification 80000 Calibrated Magnification 112000 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version RECONSTRUCTION EMAN
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details Each micrograph