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Cryo-EM reconstruction of Dengue virus at 37 C
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3C6R
Sample Dengue virus at 37 C
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument HOMEMADE PLUNGER Cryogen Name ETHANE Sample Vitrification Details Plunged into liquid ethane using a homemade plunger.
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 515 Reported Resolution (Å) 35 Resolution Method FSC 0.5 CUT-OFF Other Details (Single particle--Applied symmetry: I) Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 (3C6R, 3C6R, 3C6R) Refinement Space RECIPROCAL Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details REFINEMENT PROTOCOL--rigid body
Data Acquisition Detector Type KODAK SO-163 FILM Electron Dose (electrons/Å**2) 20
Imaging Experiment 1 Date of Experiment 2012-01-01 Temperature (Kelvin) Microscope Model FEI/PHILIPS CM200FEG Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2 Imaging Mode BRIGHT FIELD Specimen Holder Model GATAN LIQUID NITROGEN Nominal Magnification 38000 Calibrated Magnification 39190 Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version MODEL FITTING EMfit RECONSTRUCTION EMAN
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details Film