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Three-dimensional structure of Dengue virus serotype 1 complexed with HMAb 14c10 Fab
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3G7T
Sample Dengue virus serotype 1 with Fab fragment of human monoclonal antibody 14c10
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK I Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 2129 Reported Resolution (Å) 7 Resolution Method FSC 0.5 CUT-OFF Other Details particles were selected manually Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 (3G7T) Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target correlation Overall B Value Fitting Procedure Details REFINEMENT PROTOCOL--rigid body DETAILS--The domains were fitted separately
using Fit In Map feature in Chimera
Data Acquisition Detector Type GENERIC GATAN Electron Dose (electrons/Å**2) 16
Imaging Experiment 1 Date of Experiment 2010-09-27 Temperature (Kelvin) 100 Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 760 Maximum Defocus (nm) 4900 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model OTHER Nominal Magnification 47000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version MODEL FITTING UCSF Chimera RECONSTRUCTION EMAN RECONSTRUCTION MPSA
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details each particle