3J05

Three-dimensional structure of Dengue virus serotype 1 complexed with HMAb 14c10 Fab

ELECTRON MICROSCOPY

Sample
Dengue virus serotype 1 with Fab fragment of human monoclonal antibody 14c10

Specimen Preparation
Sample Aggregation State	PARTICLE
Vitrification Instrument	FEI VITROBOT MARK I
Cryogen Name	ETHANE
Sample Vitrification Details

3D Reconstruction
Reconstruction Method	SINGLE PARTICLE
Number of Particles	2129
Reported Resolution (Å)	7
Resolution Method	FSC 0.5 CUT-OFF
Other Details	particles were selected manually
Refinement Type
Symmetry Type	POINT
Point Symmetry	I

Map-Model Fitting and Refinement
Id	1 (3G7T)
Refinement Space	REAL
Refinement Protocol	RIGID BODY FIT
Refinement Target	correlation
Overall B Value
Fitting Procedure
Details	REFINEMENT PROTOCOL--rigid body DETAILS--The domains were fitted separately using Fit In Map feature in Chimera

Data Acquisition
Detector Type	GENERIC GATAN
Electron Dose (electrons/Å**2)	16

Imaging Experiment	1
Date of Experiment	2010-09-27
Temperature (Kelvin)	100
Microscope Model	FEI TITAN KRIOS
Minimum Defocus (nm)	760
Maximum Defocus (nm)	4900
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS	2.7
Imaging Mode	BRIGHT FIELD
Specimen Holder Model	OTHER
Nominal Magnification	47000
Calibrated Magnification
Source	FIELD EMISSION GUN
Acceleration Voltage (kV)	300
Imaging Details

EM Software
Task	Software Package	Version
MODEL FITTING	UCSF Chimera
RECONSTRUCTION	EMAN
RECONSTRUCTION	MPSA

Image Processing
CTF Correction Type	CTF Correction Details	Number of Particles Selected	Particle Selection Details
	each particle

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.