Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
West Nile virus in complex with Fab fragments of MAb CR4354
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
HOMEMADE PLUNGER
Cryogen Name
ETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
5006
Reported Resolution (Å)
13.7
Resolution Method
FSC 0.5 CUT-OFF
Other Details
final map includes data to 13.0 Ang resolution (FCS at about 0.2 cut-off) ( Details about the particle: The particles were selected interactively at t ...
final map includes data to 13.0 Ang resolution (FCS at about 0.2 cut-off) ( Details about the particle: The particles were selected interactively at the computer terminal. )
Refinement Type
Symmetry Type
POINT
Point Symmetry
I
Map-Model Fitting and Refinement
Id
1 (2HG0)
2 (3N9G)
Refinement Space
REAL
REAL
Refinement Protocol
RIGID BODY FIT
RIGID BODY FIT
Refinement Target
Rcrit
Rcrit
Overall B Value
Fitting Procedure
Details
REFINEMENT PROTOCOL--rigid body DETAILS--For fitting, each E monomer was
divided into two rigid bodies, DI+III (residues 1-51, 133-195, and 283-400) ...
REFINEMENT PROTOCOL--rigid body DETAILS--For fitting, each E monomer was
divided into two rigid bodies, DI+III (residues 1-51, 133-195, and 283-400) and
DII (residues other than DI+III).
REFINEMENT PROTOCOL--rigid body DETAILS--The CR4354 was divided into two rigid
bodies for fitting, the variable domain (residues L1-L115 and H1-H123, ...
REFINEMENT PROTOCOL--rigid body DETAILS--The CR4354 was divided into two rigid
bodies for fitting, the variable domain (residues L1-L115 and H1-H123, or
residues M1-M115 and K1-K123) and the constant domain (residues L116-L220 and
H124-H230, or residues M116-M220 and K124-K230)