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Crystal structure of cisplatin bound to a human copper chaperone (monomer)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 294 2M lithium sulfate, 0.1M MES, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 3.16 61.12
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.07 α = 90 b = 54.07 β = 90 c = 55.578 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 CCD MARRESEARCH 2009-04-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-B 0.90511 APS 23-ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 50 13182
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 46.83 12060 12681 621 99.6 0.181 0.179 0.1791 0.21 0.2096 RANDOM 21.001
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.24 0.12 0.24 -0.36
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.149 r_dihedral_angle_3_deg 10.582 r_dihedral_angle_1_deg 5.766 r_scangle_it 4.708 r_scbond_it 2.922 r_mcangle_it 1.592 r_angle_refined_deg 1.252 r_mcbond_it 0.743 r_dihedral_angle_4_deg 0.225 r_chiral_restr 0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.149 r_dihedral_angle_3_deg 10.582 r_dihedral_angle_1_deg 5.766 r_scangle_it 4.708 r_scbond_it 2.922 r_mcangle_it 1.592 r_angle_refined_deg 1.252 r_mcbond_it 0.743 r_dihedral_angle_4_deg 0.225 r_chiral_restr 0.11 r_bond_refined_d 0.01 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 496 Nucleic Acid Atoms Solvent Atoms 91 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction SCALEPACK data scaling