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Crystal structure of TioX from Micromonospora sp. ML1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 295 Reservoir solution: 400 mM sodium potassium tartrate, 25 mM ammonium sulfate, 2% glycerol, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 3.46 64.45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 109.321 α = 90 b = 109.321 β = 90 c = 143.333 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 2007-08-16 M SINGLE WAVELENGTH 2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D APS 21-ID-D 2 SYNCHROTRON APS BEAMLINE 23-ID-B APS 23-ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 40 47329
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION Se MAD/MIR THROUGHOUT 2.15 40 22426 1205 98.73 0.23403 0.2323 0.2283 0.26786 0.266 RANDOM 73.024
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.1 -0.1 0.19
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.864 r_dihedral_angle_3_deg 18.964 r_dihedral_angle_4_deg 18.931 r_dihedral_angle_1_deg 5.235 r_scangle_it 2.243 r_scbond_it 1.406 r_angle_refined_deg 1.17 r_mcangle_it 0.942 r_mcbond_it 0.597 r_nbtor_refined 0.298
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.864 r_dihedral_angle_3_deg 18.964 r_dihedral_angle_4_deg 18.931 r_dihedral_angle_1_deg 5.235 r_scangle_it 2.243 r_scbond_it 1.406 r_angle_refined_deg 1.17 r_mcangle_it 0.942 r_mcbond_it 0.597 r_nbtor_refined 0.298 r_symmetry_vdw_refined 0.256 r_symmetry_hbond_refined 0.218 r_nbd_refined 0.18 r_xyhbond_nbd_refined 0.135 r_chiral_restr 0.08 r_bond_refined_d 0.009 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1957 Nucleic Acid Atoms Solvent Atoms 101 Heterogen Atoms
Software Software Software Name Purpose SOLVE phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling