☰ Navigation Tabs
Crystal structure of filamin-A immunoglobulin-like repeat 21 bound to an N-terminal peptide of CFTR
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2BRQ PDB entry 2BRQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 293 0.1M Bis-Tris Propane pH 7.0, 60% Tacsimate, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 5.13 76.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 74.152 α = 90 b = 74.152 β = 90 c = 289.063 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD NOIR-1 ROSENBAUM-ROCK MONOCHROMATOR FOR SAGITAL FOCUSING, ROSENBAUM-ROCK VERTICAL FOCUSING MIRROR 2007-07-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 4.2.2 1.0000 ALS 4.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 42.97 96.6 0.071 0.071 13.8 8.53 13108 12452 5 75.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.8 2.9 98.5 0.472 0.472 3.3 10.41 1177
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB entry 2BRQ 2.8 34.73 12007 12007 580 96.4 0.264 0.264 0.263 0.2479 0.298 0.2812 RANDOM 69.191
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 4.72 2.36 4.72 -7.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.121 r_dihedral_angle_4_deg 25.752 r_dihedral_angle_3_deg 20.376 r_dihedral_angle_1_deg 7.589 r_scangle_it 3.519 r_scbond_it 1.994 r_mcangle_it 1.853 r_angle_refined_deg 1.644 r_mcbond_it 1.03 r_nbtor_refined 0.318
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.121 r_dihedral_angle_4_deg 25.752 r_dihedral_angle_3_deg 20.376 r_dihedral_angle_1_deg 7.589 r_scangle_it 3.519 r_scbond_it 1.994 r_mcangle_it 1.853 r_angle_refined_deg 1.644 r_mcbond_it 1.03 r_nbtor_refined 0.318 r_symmetry_vdw_refined 0.261 r_nbd_refined 0.24 r_xyhbond_nbd_refined 0.18 r_symmetry_hbond_refined 0.164 r_chiral_restr 0.107 r_bond_refined_d 0.015 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1504 Nucleic Acid Atoms Solvent Atoms 14 Heterogen Atoms
Software Software Software Name Purpose d*TREK data scaling REFMAC refinement PDB_EXTRACT data extraction d*TREK data reduction PHASER phasing