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Crystal structure of protein with unknown function from DUF35 family (13815350) from SULFOLOBUS SOLFATARICUS at 1.80 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.6 277 2.0M (NH4)2SO4, 0.1M Acetate pH 4.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.45 49.79
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.17 α = 90 b = 75.17 β = 90 c = 115.4 γ = 90
Symmetry Space Group P 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 Flat mirror (vertical focusing) 2006-03-03 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.918370,0.979386,0.979170 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 26.939 99.2 0.081 9.73 7.056 31362 -3 24.984
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 93 0.792 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.8 26.939 31317 1560 99.77 0.171 0.169 0.1785 0.2 0.2112 RANDOM 24.083
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.4 0.4 -0.81
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.355 r_dihedral_angle_4_deg 18.629 r_dihedral_angle_3_deg 11.872 r_scangle_it 8.23 r_dihedral_angle_1_deg 5.753 r_scbond_it 5.467 r_mcangle_it 3.194 r_mcbond_it 1.846 r_angle_refined_deg 1.408 r_angle_other_deg 0.845
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.355 r_dihedral_angle_4_deg 18.629 r_dihedral_angle_3_deg 11.872 r_scangle_it 8.23 r_dihedral_angle_1_deg 5.753 r_scbond_it 5.467 r_mcangle_it 3.194 r_mcbond_it 1.846 r_angle_refined_deg 1.408 r_angle_other_deg 0.845 r_mcbond_other 0.531 r_chiral_restr 0.091 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2146 Nucleic Acid Atoms Solvent Atoms 201 Heterogen Atoms 40
Software Software Software Name Purpose REFMAC refinement PHENIX refinement SHELX phasing MolProbity model building XSCALE data scaling PDB_EXTRACT data extraction XDS data reduction SHELXD phasing autoSHARP phasing